- Acouchi - Myoprocta acouchy (formerly, pratti)
- Alpaca - Lama pacos
- Anteater, giant - Myrmecophaga tridactyla
- Armadillo, southern (formerly La Plata) three-banded - Tolypeutes matacus
- Banded mongoose - Mungos mungo
- Bear, sloth - Melursus ursinus
- Bear, Andean or spectacled - Tremarctos ornatus
- Beaver, American - Castor canadensis
- Bison, American - Bison bison (SCBI Front Royal only)
- Caracal - Caracal caracal
- Cat, fishing - Prionailurus viverrinus
- Cavy, rock - Kerodon rupestris
- Cheetah - Acinonyx jubatus
- Clouded leopard - Neofelis nebulosa
- Coati - Nasua narica
- Colobus, black-and-white or guereza - Colobus guereza
- Cow, Hereford - Bos taurus taurus hereford
- Cow, Holstein - Bos taurus taurus holstein
- Deer, Burmese brow-antlered (Eld's deer) - Cervus eldi thamin (SCBI Front Royal only)
- Deer, tufted - Elaphodus cephalophus (SCBI Front Royal only)
- Degu - Octodon degus
- Donkey, miniature - Equus asinus asinus miniature
- Elephant, Asian - Elephas maximus
- Elephant-shrew, Black and rufous giant - Rhynchocyon petersi
- Ferret, black-footed - Mustela nigripes
- Gazelle, Dama - Gazella dama
- Gibbon, white-cheeked - Nomascus leucogenys
- Goat, Nigerian dwarf - Capra hircus hircus nigerian dwarf
- Goat, Nubian - Capra hircus hircus anglo nubian
- Goat, San Clemente Island - Capra hircus hircus san clemente
- Gorilla, western lowland - Gorilla gorilla gorilla
- Hog, Ossabaw Island - Sus scrofa scrofa
- Horse, Przewalski's - Equus caballus przewalskii or Equus ferus przewalskii
- Hyrax, rock - Procavia capensis
- Lemur, ring-tailed - Lemur catta
- Lemur, red-fronted (subspecies of brown lemur) - Lemur fulvus rufus
- Lemur, red-ruffed - Varecia variegata rubra
- Lion, African - Panthera leo leo
- Macaque, Celebes crested (formerly, Sulawesi) - Macaca nigra
- Macaque, liontail - Macaca silenus
- Marmoset, Geoffroy's (White-fronted or tufted-eared marmoset) - Callithrix geoffroyi
- Meerkat - Suricata suricatta
- Mole rat, Damaraland - Cryptomys damarensis
- Mole-rat, Naked - Heterocephalus glaber
- Monkey, black howler - Alouatta caraya
- Onager, Persian - Equus hemionus onager (SCBI Front Royal only)
- Orangutan, Bornean - Pongo pygmaeus
- Orangutan, Sumatran-Bornean - Pongo pygmaeus abelii
- Oryx, scimitar-horned - Oryx dammah
- Otter, Asian small-clawed - Aonyx cinerea
- Otter, North American river - Lontra (formerly, Lutra) canadensis
- Panda, giant - Ailuropoda melanoleuca
- Panda, red - Ailurus fulgens
- Peccary, collared - Tayassu tajacu
- Porcupine, prehensile-tailed - Coendou prehensilis
- Prairie dog, black-tailed - Cynomys ludovicianus
- Rabbit, silver fox - Oryctolagus cuniculus
- Saki, Guianan (Pale-headed saki) - Pithecia pithecia
- Seal, gray - Halichoerus grypus
- Siamang - Hylobates syndactylus
- Sloth, two-toed - Choloepus didactylus
- Squirrel, Prevost's - Callosciurus prevosti
- Tamarin, golden lion - Leontopithecus rosalia
- Tamarin, golden-headed lion - Leontopithecus chrysomelas
- Tenrec, greater Madagascar - Setifer setosus
- Tenrec, small Madagascar hedgehog - Echinops telfairi
- Tiger, Sumatran - Panthera tigris sumatrae
- Titi, dusky (Orabussu titi) - Callicebus moloch
- Tree shrew, northern - Tupaia belangeri
- Wallaby, tammar - Macropus eugeni
- Wolf, maned - Chrysocyon brachyurus
- Zebra, Grevy's - Equus grevyi
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